JCR papers (Last update 16/02/2022)

If you are interested in one of my papers and you can not download it please ask me and I will send it to you

                                                               [Underline for supervised student* for equal contribution as first/senior author]

acalles53.  ARJONA, Y.; ARRIBAS, P.; SALCES-CASTELLANO, A.; LÓPEZ, H.; EMERSON, B.C. & ANDÚJAR, C. Metabarcoding for biodiversity invventory blind spots: a test case using the beetle fauna of an insular cloud forest (Under review).

acaro_coll52.  ANDÚJAR, C.; ARRIBAS, P.; LÓPEZ, H.; ARJONA, Y.; PÉREZ-DELGADO, A.; OROMÍ, P.; VOGLER, A.P. & EMERSON, B.C. Community assembly and metaphylogeography of soil biodiversity: insights from haplotype-level community DNA metabarcoding within an oceanic island (Under review).

51.  SUÁREZ, D.; ARRIBAS, P.; JIMÉNEZ-GARCÍA, E. & EMERSON, B.C. Dispersal ability and its consequences for population genetic differenciation and diversification (Under review).

estafilinido50.  PÉREZ-DELGADO, A.; ARRIBAS, P.; HERNÁNDO, C.; LÓPEZ, H.; ARJONA, Y.; SUÁREZ, D.; EMERSON, B.C. & ANDÚJAR, C. Hidden island endemic species, and their implications for cryptic speciation within soil arthropods (Under review).

curcurlionido49. ARRIBAS, P.;  ANDÚJAR, C.; BOHMANN, K.; DEWAARD, J.R.; ECONOMO, E.P.; ELBRECHT, V.; GEISEN, S.; GOBERNA, M.; KREHENWINKEL, H.; NOVOTNY, V.; ZINGER, L.; CREEDY, T.J.; MERAMVELIOTAKIS, E.; NOGUERALES, V.; OVERCAST, I.; MORLON, H.; PAPADOPOULOU, A.; VOGLER, A.P. & EMERSON B.C. Toward global integration of biodiversity big data: a harmonised metabarcode data generation module for terrestrial arthropods (Under review).

curcurlionida48. OVERCAST, I.; ACHAZ, G.; AGUILÉE, R.; ANDÚJAR, C.; ARRIBAS, P.; CREEDY, T.J.; ECONOMO, E.P.; ETIENNE, R.; GILLESPIE, R.; JACQUET, C.; JAY, F. KENNEDY, S.; KREHENWINKEL, H.; PEREZ-LAMARQUE, B.; LAMBERT, A.; MERAMVELIOTAKIS, E.; NOGUERALES, V.; RODERICK, G.; ROGERS, H.; RUFFLEY, M.; SANMARTIN, I.; VOGLER, A.P.; PAPADOPOULOU, A.; EMERSON, B.C. & MORLON, H. Genetic Theory of Island Biogeography: inferring processes from multi-dimensional community-scale data (Under review).

curcurlionido47. FORMENTI, G.; THEISSINGER, K.; FERNANDES, C.; BISTA, I.; BOMBARELY, A., BLEIDORN, C.; […]; ARRIBAS, P.; […] & ZAMMIT, G. 2022. The era of reference genomes in conservation genomics. Trends in Ecology and Evolution (in press). Link

46. ALONSO, P.; PARGA-DANS, E.; ARRIBAS, P.; PÉREZ, O.; ZUMBADO, M.L.; HERNÁNDEZ, M.M.; RODRÍGUEZ-HERNÁNDEZ, A. & ANDÚJAR, C. 2021. Elemental composition, rare earths and minority elements in organic and conventional wines from volcanic areas: The Canary Islands (Spain). PLoS ONE,16: e0258739. Link

staphiliniformia45. NOGUERALES, V.; MERAMVELIOTAKIS, E.; CASTRO-INSUA, A.;  ANDÚJAR, C.; ARRIBAS, P.; CREEDY, T.J.; OVERCAST, I.; MORLON, H.; EMERSON, B.C.; VOGLER, A.P. & PAPADOPOULOU, A. 2021. Community metabarcoding reveals the relative role of environmental filtering and spatial processes in metacommunity dynamics of soil microarthropods across a mosaic of montane forests. Molecular Ecology (in press). Link

44. CREEDY, T.J.; ANDÚJAR, C.; MERAMVELIOTAKIS, E.; NOGUERALES, V.; OVERCAST, I.; PAPADOPOULOU, A.; MORLON, H.; VOGLER, A.P.; EMERSON, B.C. &  ARRIBAS, P. 2021. Coming of age for COI metabarcoding of whole organism community DNA: towards bioinformatic harmonisation. Molecular Ecology (in press). Link

43. GÁLVEZ-REYES, N.; ARRIBAS, P.; ANDÚJAR, C.; EMERSON, B.C.; PIÑERO, D. & MASTRETA-YANES, A. 2021. Local-scale dispersal constraints promote spatial structure and arthropod diversity within a tropical sky-island. Molecular Ecology, 30: 48-61. Link

acalles42. SALCES-CASTELLANO, A.; ANDÚJAR, C.; LÓPEZ, H.; PÉREZ-DELGADO, A.; ARRIBAS, P.* & EMERSON, B.C.* 2021. Flightlessness in insects enhances diversification and determines assemblage structure across whole communities. Proceedings of the Royal Society B, 288: 20202646. *equal contribution. Link

curcurlionido41. ANDÚJAR, C.; CREEDY, T.J.; ARRIBAS, P.; LÓPEZ H.; SALCES-CASTELLANO, A.; PÉREZ-DELGADO, A., VOGLER, A.P. & EMERSON, B.C. 2021. Validated removal of nuclear pseudogenes and sequencing artefacts from mitochondrial metabarcode data. Molecular Ecology Resources, 21: 1772-1787. Link *Perspective on our paper published in same Molecular Ecology Resources issue* *Highlighted as a From the cover article*

acaro_coll40. ARRIBAS, P.;  ANDÚJAR, C.; BIDARTONDO, M.I.; BOHMANN, K.; COISSAC, E.; CREER, S.; DEWAARD, J.R.; ELBRECHT, V.; FICETOLA, G.F.; GOBERNA, M.; KENNEDY, S.; KREHENWINKEL, H.; LEESE, F,; NOVOTNY, V.; RONQUIST, F.; YU, D.W.; ZINGER, L.; CREEDY, T.J.; MERAMVELIOTAKIS, E.; NOGUERALES, V.; OVERCAST, I.; MORLON, H.; VOGLER, A.P.; PAPADOPOULOU, A. & EMERSON B.C. 2021. Connecting high-throughput biodiversity inventories – opportunities for a site-based genomic framework for global integration and synthesis. Molecular Ecology, 30: 1120-1135. Link

acalles39. SALCES-CASTELLANO, A.; STANKOWSKI, S.; ARRIBAS, P.; PATIÑO, J.; KARGER, D.N.; BUTLIN, R.  & EMERSON, B.C. 2021. Long-term cloud forest response to climate warming revealed by insect speciation. Evolution, 75: 231-244. Link

acaro_coll38. ARRIBAS, P.; ANDÚJAR, C.; SALCES-CASTELLANO, A.; EMERSON, B.C. &  VOGLER, A.P. 2021. The limited spatial scale of dispersal in soil arthropods revealed with whole-community haplotype-level metabarcoding. Molecular Ecology, 30: 48-61. Link *Perspective on our paper published in same Molecular Ecology issue* *Highlighted as a From the cover article*

och37. VILLASTRIGO, A.; ARRIBAS, P.  &  RIBERA, I. 2020. Irreversible habitat specialization does not constraint diversification in hypersaline water beetles. Molecular Ecology, 29: 3637-3648. Link

Paula Arribas36. WATERS, J.; EMERSON, B.C. ARRIBAS, P. & McCULLOCH, G. 2020. Dispersal reduction: causes, genomic mechanisms, and evolutionary consequences. Trends in Ecology and Evolution, 35: 512-522. Link

mites35. ARRIBAS, P.; ANDÚJAR, C.; MORAZA, M.L.; LINARD, B.; EMERSON, B.C. & VOGLER, A.P. 2020. Mitochondrial metagenomics reveals the ancient origin and phylodiversity of soil mites and provides a phylogeny for the Acari. Molecular Biology and Evolution, 37: 683–694. Link

acalles34. SALCES-CASTELLANO, A.; PATIÑO, J.; ALVAREZ, N.;   ANDÚJAR, C.; ARRIBAS, P.; BRAOJOS-RUIZ, J.J.; del ARCO-AGUILAR, M.; GARCÍA-OLIVARES, V.; KARGER, D.; LÓPEZ, H.; MANOLOPOULOU, I.; OROMÍ, P.; PÉREZ-DELGADO, A.J.; PETERMAN, W.E.; FIJSKIJK, K.F. & EMERSON, B.C. 2020. Microclimate drives community-wide speciation on an oceanic island. Ecology Letters, 23: 305-315. Link

33. CREEDY, T.; NORMAN, H.; TANG, C.; QUING CHIN, K.; ANDÚJAR, C.; ARRIBAS, P.; O’CONNOR, R.; CARVELL, C.; NOTTON, D. & VOGLER, A.P. 2020. A validated workflow for rapid taxonomic assignment and monitoring of a national fauna of bees (Apiformes) using high throughput barcoding. Molecular Ecology Resources, 20: 40-53. Link

Paula Arribas32. EMERSON, B.C.; SALCES-CASTELLANO, A. & ARRIBAS, P. 2019. Dispersal limitation: evolutionary origins and consequences in arthropods. Molecular Ecology, 28: 3137-3140. Link

31. ANDÚJAR, C.; ARRIBAS, P.; MOTYKA, M.; BOCEK, M.; estafilinidoBOCAK, L.; LINARD, B. & VOGLER, A.P. 2019. New mitochondrial genomes of thirty-nine soil dwelling Coleoptera from metagenome sequencing. Mitochondrial DNA Part B, 4: 2447-2450. Link

neb30. GUTIÉRREZ-CÁNOVAS, C.; ARRIBAS, P.; NASELLI-FLORES, L.; BENNAS, N.; FINOCCHIARO, M.; MILLÁN, A. & VELASCO, J. 2019. Evaluating anthropogenic impacts on naturally stressed ecosystems: Revisiting river classifications and biomonitoring metrics along salinity gradients. Science of The Total Environment, 658: 912-921. Link

eno29. ARRIBAS, P.; GUTIÉRREZ-CÁNOVAS, C.; BOTELLA-CRUZ, M.; CAÑEDO-ARGÜELLES, M.; CARBONELL, J.A.; MILLÁN, A.; PALLARÉS, S.; VELASCO, J. & SÁNCHEZ-FERNÁNDEZ, D. 2018. Insect communities in saline waters consist of realized but not fundamental niche specialists. Philosophical Transactions of the Royal Society B, 374: 20180008. Link

och28. VELASCO, J.; GUTIÉRREZ-CÁNOVAS, C.; BOTELLA-CRUZ, M.; SÁNCHEZ-FERNÁNDEZ, D.; ARRIBAS, P.; CARBONELL, J.A.; MILLÁN, A. & PALLARÉS, S. 2018. Effects of salinity changes on aquatic organisms in a multiple stressor context. Philosophical Transactions of the Royal Society B, 374: 20180011. Link

acaro_coll27. ANDÚJAR, C.; ARRIBAS, P.; YU, D.W.; VOGLER, A.P. & EMERSON B.C. 2018. Why the COI barcode should be the community DNA metabarcode for the metazoa. Molecular Ecology, 27: 3968-3975. Link pdf

curcurlionida26. LINARD, B.; CRAMPTON-PLATT, A.; MORINIERE, J.;  TIMMERMANS, M.J.; ANDÚJAR, C.; ARRIBAS, P.; MILLER, K.; LIPECKI, J.; FAVREAU, E.; GÓMEZ-RODRÍGUEZ, C.; BARTON, C.; NIE, R.E.; GILLET, C.P.D.T.; BREESCHOTEN, T.; BOCAK, L. & VOGLER, A.P. 2018. The contribution of mitochondrial metagenomics to largescale data mining and phylogenetic analysis of Coleoptera. Molecular Phylogenetics and Evolution, 128: 1-11. Link  pdf

Hydropsyche pellucidula.25. ANDÚJAR, C.; ARRIBAS, P.; GRAY, C.; BRUCE, K.; WOODWARD, G.; YU, D. & VOGLER, A.P. 2018. Metabarcoding of freshwater invertebrates to detect the effects of a pesticide spill. Molecular Ecology, 27: 146-166. Link pdf

typhlo24. ANDÚJAR, C.; PÉREZ, S.; ARRIBAS, P.; ZABALLOS, J.; VOGLER, A.P. & RIBERA, I. 2017. Speciation below ground: Tempo and mode of diversification in a radiation of endogean ground beetles. Molecular Ecology, 26: 6053-6070. Link pdf

eno23. PALLARÉS, S.; ARRIBAS, P.; BILTON, D.T.; MILLÁN, A.; VELASCO, J. & RIBERA, I.  2017. The chicken or the egg? Adaptation to desiccation and salinity tolerance in a lineage of water beetles. Molecular Ecology, 26: 5614-5628. Link pdf

22. ANDÚJAR, C.; ARRacaro_collIBAS, P. & VOGLER, A.P. 2017. Terra incognita of soil biodiversity: unseen invasions under our feet. Molecular Ecology, 26: 3087–3089. Link pdf

iberobaenia.21. ANDÚJAR, C.; ARRIBAS, P.; LINARD, B.; KUNDRATA, R.; BOCAK, L. & VOGLER, A.P. 2017 The mitochondrial genome of Iberobaenia (Coleoptera: Iberobaeniidae): First rearrangement of protein coding genes in the beetles. Mitochondrial DNA, 28(2): 156-158.  Link pdf

eno20. PALLARÉS, S.; BOTELLA-CRUZ, M.; ARRIBAS, P.; MILLÁN, A. &  VELASCO, J. 2017. Aquatic insects in a multistress environment: cross-tolerance to salinity and desiccation. Journal of Experimental Biology, 220: 1277-1286. Link pdf

Hydropsyche pellucidula.19. LINARD, B.; ARRIBAS, P.; ANDÚJAR, C.; CRAMPTON-PLATT, A.; VOGLER, A.P. 2017. The mitogenome of Hydropsyche pellucidula (Hydropsychidae): first gene arrangement in the insect order Trichoptera. Mitochondrial DNA, 28(1): 71-72. Link pdf

staphiliniformia18. LINARD, B.*; ARRIBAS, P.*; ANDÚJAR, C.; CRAMPTON-PLATT, A.; VOGLER, A.P. 2016 Lessons from genome skimming of arthropod-preserving ethanol. Molecular Ecology Resources, 16(6): 1365-1377. *equal contribution. Link pdf

17. PAenoLLARÉS, S.; VELASCO, J.; MILLÁN, A.; BILTON, D.T. & ARRIBAS, P. 2016. Aquatic insects dealing with dehydration: do desiccation resistance traits differ in species with contrasting habitat preferences? PeerJ, 4: e2382. Link pdf

16. ARRacaro_collIBAS, P.; ANDÚJAR, C.; HOPKINS, K.; SHEPHERD, M. & VOGLER, A.P. 2016. Metabarcoding and mitochondrial metagenomics of endogean arthropods to unveil mesofauna of the soil. Methods in Ecology and Evolution, 7(1): 1071-1081. Link pdf

eno15. ARRIBAS, P.; ABELLÁN, P.; VELASCO, J. & MILLÁN, A. 2015. Evolutionary ecology, biogeography and conservation of water beetles in Mediterranean saline ecosystems. Limnetica, 34(2): 481-494. Link pdf

typhlo14. ANDÚJAR, C.; ARRIBAS, P.; RUZICKA, F.; CRAMPTON-PLATT, A.; TIMMERMANS M.J., A. & VOGLER, A.P. 2015. Phylogenetic community ecology of soil biodiversity using mitochondrial metagenomics. Molecular Ecology, 24(14): 3603-3617. Link pdf *Perspective on our paper published in same Molecular Ecology issue*

neb13. PALLARÉS, S.; ARRIBAS, P.; BILTON, D.T.; MILLÁN, A. & VELASCO, J. 2015. The comparative osmoregulatory ability of two water beetle genera whose species span the fresh-hypersaline gradient in inland waters (Coleoptera: Dytiscidae, Hydrophilidae). PloS ONE, 10(4): e0124299. Link pdf

carabus12. ANDÚJAR, C.; ARRIBAS, P.; RUIZ, C.; SERRANO, J.; GÓMEZ-ZURITA, J. 2014. Integration of conflict into Integrative Taxonomy: Fitting hybridization in the delimitation of species in Mesocarabus (Coleoptera: Carabidae). Molecular Ecology, 23(17): 4344-4361. Link pdf *Perspective on our paper published in same Molecular Ecology issue*

eno11. ARRIBAS, P.; ANDÚJAR, C.; ABELLÁN, P.; VELASCO, J.; MILLÁN, A. & RIBERA, I. 2014. Tempo and mode of the multiple origins of salinity tolerance in a water beetle lineage. Molecular Ecology, 23(2): 360-373. Link pdf

neb10. CÉSPEDES, V.; PALLARÉS, S.; ARRIBAS, P.; MILLÁN, A. & VELASCO, J. 2013. Water beetle tolerance to salinity and anionic composition and its relationship to habitat occupancy. Journal of Insect Physiology, 59(10): 1076-1084. Link pdf

eno9. ARRIBAS, P.; ANDÚJAR, C.; SÁNCHEZ-FERNÁNDEZ, D.; ABELLÁN, P. & MILLÁN, A. 2013. Integrative taxonomy and conservation of cryptic beetles in the Mediterranean region (Hydrophilidae). Zoologica Scripta, 42(2): 182-200. Link pdf

och8. PALLARÉS, S.; ARRIBAS, P.; CÉSPEDES, V.; P.; MILLÁN, A. & VELASCO, J. 2012. Lethal and sublethal behavioural responses of saline water beetles to acute heat and osmotic stress. Ecological Entomology, 37(6): 508-520. Link pdf

neb7. ARRIBAS, P.; ABELLÁN, P.; VELASCO, J.; BILTON, D.T.; MILLÁN, A. & SÁNCHEZ-FERNÁNDEZ, D. 2012. Evaluating drivers of vulnerability to climate change: a guide for insect conservation strategies. Global Change Biology, 18(7): 2135-2146. Link pdf

och6. ABELLÁN, P.; ARRIBAS, P. & SVENNING, J.C. 2012. Geological habitat template overrides late Quaternary climate change as a determinant of range dynamics and phylogeography in some habitat-specialist water beetles. Journal of Biogeography, 39(5): 970-983. Link pdf

eno5. ARRIBAS, P.; VELASCO, J.; ABELLÁN, P.; SÁNCHEZ-FERNÁNDEZ, D.; ANDÚJAR, C.; CALOSI, P.; MILLÁN, A.; RIBERA, I. & BILTON, D.T. 2012. Dispersal ability rather than ecological tolerance drives differences in range size between lentic and lotic water beetles (Coleoptera: Hydrophilidae). Journal of Biogeography, 39(5): 984-994. Link pdf

och4. MILLÁN, A.; VELASCO, J.; GUTIÉRREZ-CÁNOVAS, C.; ARRIBAS, P.; PICAZO, F; SÁNCHEZ-FERNÁNDEZ, D. & ABELLÁN, P. 2011. Mediterranean saline streams in southeast Spain: What do we know? Journal of Arid Environments, 75(12): 1352-1359. Link pdf

aphelocheirus3. CARBONELL, J. A., ABELLÁN, P., ARRIBAS, P., ELDER, J. F. & MILLÁN. A. 2011. The Genus Aphelocheirus Westwood, 1833 (Hemiptera: Aphelocheiridae) in the Iberian Peninsula. Zootaxa, 2771: 1-16. Link pdf

neb2. SÁNCHEZ‐FERNÁNDEZ, D.; CALOSI, P.; ATFIELD, A.; ARRIBAS, P.; VELASCO, J.; SPICER, J.I.; MILLÁN, A. & BILTON, D.T. 2010. Reduced salinities compromise the thermal tolerance of hypersaline specialist diving beetles. Physiological entomology, 35(3): 265-273. Link pdf

och1. ARRIBAS, P.; VELASCO, J.; ABELLÁN, P.; SÁNCHEZ‐FERNÁNDEZ, D.; CALOSI, P.; BILTON, D.T. & MILLÁN, A. 2009. Dispersal responses and tolerance to temperature and salinity in two hydraenid beetles from hypersaline inland waters. Comparative Biochemistry and Physiology A, 153(2): S171 – S172. Link